专利号:US-2023235372-A1 优先权日:2020-06-12 标题:Ab-initio, template-independent synthesis of nucleic acids using thermostable enzymes 发明人:RANDRIANJATOVO-GBALOU IRINA; SAID AHMED; RAHIER RENAUD 权利人:SYNHELIX 摘要:The invention relates to the field of nucleic acid synthesis or sequencing, more specifically to methods for ab-initio synthesis of nucleic acids, comprising contacting a nucleotide with a free 3′-hydroxyl group, with at least one nucleoside triphosphate, or a combination of nucleoside triphosphates, in the presence of an archaeal DNA primase or a functionally active fragment and/or variant thereof, thereby covalently binding said nucleoside triphosphate to the free 3′-hydroxyl group of the nucleotide. It also relates to isolated functionally active fragments of archaeal DNA primases which are capable of both ab-initio single-stranded nucleic acid synthesis activity and template-independent terminal nucleotidyl transferase activity.
专利号:US-10501782-B1 优先权日:2014-09-05 标题:Cell-free synthesis of DNA by strand displacement 发明人:PORTER NEIL; ROTHWELL PAUL; EXTANCE JONATHAN 权利人:TOUCHLIGHT IP LTD 摘要:The present invention relates to an improved process for synthesis of DNA, RNA, proteins and like molecules, in particular cell-free enzymatic synthesis of DNA, preferably in large scale. The present invention relates to the synthesis of DNA using strand-displacement replication and the addition of nucleotides to the reaction mixture is controlled, thus controlling yield. The reaction mixture contains a starting amount of nucleotides, polymerase and DNA template, to which further nucleotides are supplied in a controlled manner.
专利号:US-2023313255-A1 优先权日:2020-07-15 标题:Massively Parallel Enzymatic Synthesis of Polynucleotides 发明人:HORGAN ADRIAN; LACHAIZE HENRI; VERARDO DOMIANO; GODRON XAVIER 权利人:DNA SCRIPT 摘要:The invention is directed to methods and compositions for inkjet assisted synthesis of a plurality of polynucleotides at reaction sites on a substrate using template-free polymerases, such as, terminal deoxynucleotidyl transferases (TdTs). Compositions of the invention include formulations of synthesis reagents for inkjet delivery including, but not limited to, TdT coupling reaction buffers and 3′-O-protected dNTP monomers.
专利号:US-7344863-B2 优先权日:1998-03-13 标题:Methods for producing polypeptides through enhanced synthesis of encoding nucleic acid molecules 发明人:LI WU-BO; JESSEE JOEL A; SCHUSTER DAVID; XIA JIULIN; GEBEYEHU GULILAT 权利人:INVITROGEN CORP 摘要:The present invention is directed to compositions and methods for enhancing synthesis of nucleic acid molecules, particularly GC-rich nucleic acid molecules. Specifically, the invention provides compositions comprising one or more nitrogen-containing organic compounds having a formula selected from the group consisting of formula I and formula II (or salts or derivatives thereof), preferably 4-methylmorpholine N-oxide or betaine (carboxymethyltrimethylammonium), and further comprising one or more compounds selected from the group consisting of proline and an N-alkylimidazole compound, and more preferably proline, 1-methylimidazole or 4-methylimidazole. The invention further relates to methods for enhanced, high-fidelity synthesis of nucleic acid molecules, including via amplification (particularly PCR), reverse transcription, and sequencing methods. The invention also relates to nucleic acid molecules synthesized by these methods, to fragments or derivatives thereof, and to vectors and host cells comprising such nucleic acid molecules, fragments, or derivatives. The invention also relates to kits for synthesizing, amplifying, reverse transcribing or sequencing nucleic acid molecules comprising one or more of the compositions of the invention.
专利号:US-12421628-B2 优先权日:2018-07-23 标题:Massively parallel enzymatic synthesis of nucleic acid strands 发明人:HORGAN ADRIAN; GODRON XAVIER; YBERT THOMAS; NICOL ROBERT 权利人:DNA SCRIPT 摘要:The invention is directed to methods for massively parallel template-free enzymatic synthesis of a plurality of different polynucleotides of predetermined sequences. In one aspect, methods of the invention employ large scale arrays of reaction sites each associated with at least one working electrode for controlling deprotection and deblocking steps at predetermined user selected sites. In another aspect, the invention provides template-free enzymatic synthesis with proofreading, wherein completed polynucleotides at predetermined reaction sites are sequenced using a sequencing by synthesis technique, particularly employing electrochemically labile blocking groups.
专利号:US-6576447-B2 优先权日:2000-03-21 标 题:Method for synthesis of nucleic acids 发明人:TONOIKE HIROSHI 权利人:SHIMADZU CORP 摘要:An object of the present invention is to provide a novel method for suppressing the action of nucleic acid synthesis inhibitory substances and thereby amplifying a nucleic acid in a sample efficiently.According to the present invention, in a method for synthesis of nucleic acids to amplify an intended nucleic acid in a sample, the sample is brought in advance into contact with an insoluble polymer of a polyanion, a sulfated polymer or a sulfated polysaccharide, to remove nucleic acid synthesis inhibitory substances.
[参考文献]: P J Romaniuk, A Study Of The Mechanism Of T4 Dna Polymerase With Diastereomeric Phosphorothioate Analogues Of Deoxyadenosine Triphosphate. J Biol Chem. 1982 Jul 10;257(13):7684-8. [参考文献]: Fadia Haddad, Et Al. Reverse Transcription Of The Ribonucleic Acid: The First Step In Rt-Pcr Assay. Methods Mol Biol. 2010:630:261-70. [参考文献]: Gajraj Singh Kushwaha, Et Al. Crystal Structures Of A Type-1 Ribosome Inactivating Protein From Momordica Balsamina In The Bound And Unbound States. Biochim Biophys Acta. 2012 Apr;1824(4):679-91. [参考文献]: J E Reardon, Et Al. Human Immunodeficiency Virus Reverse Transcriptase: Steady-State And Pre-Steady-State Kinetics Of Nucleotide Incorporation. Biochemistry. 1992 May 12;31(18):4473-9. [参考文献]: Jennifer N Patro, Et Al. Role Of The 2-Amino Group Of Purines During Dntp Polymerization By Human Dna Polymerase Alpha. Biochemistry. 2009 Jan 13;48(1):180-9.
合成参考文献
参考文献:10.1007/s00216-010-3506-1 摘要:Carvalho JJ, Weller MG, Panne U, Schneider RJ. A highly sensitive caffeine immunoassay based on a monoclonal antibody. Analytical and Bioanalytical Chemistry. 2010 Feb 16;396(7):2617–28. doi: 10.1007/s00216-010-3506-1. 参考文献:10.1016/j.jmb.2010.02.019 摘要:Lansdon EB, Samuel D, Lagpacan L, Brendza KM, White KL, Hung M, Liu X, Boojamra CG, Mackman RL, Cihlar T, Ray AS, McGrath ME, Swaminathan S. Visualizing the molecular interactions of a nucleotide analog, GS-9148, with HIV-1 reverse transcriptase-DNA complex. J Mol Biol. 2010 Apr 09;397(4):967–78. doi: 10.1016/j.jmb.2010.02.019. 参考文献:10.1007/978-1-61779-188-8_21 摘要:Benítez-Hess ML, Reyes-Gutiérrez P, Alvarez-Salas LM. Inhibition of human papillomavirus expression using DNAzymes. Methods Mol Biol. 2011;764():317–35. doi: 10.1007/978-1-61779-188-8_21. 参考文献:10.1007/s00436-011-2517-y 摘要:Ghaemi P, Hoghooghi-Rad N, Shayan P, Eckert B. Detection of Theileria orientalis in Iran by semi-nested PCR. Parasitol Res. 2012 Feb;110(2):527–31. doi: 10.1007/s00436-011-2517-y. 参考文献:10.1074/jbc.m111.250456 摘要:Vorontsov II, Minasov G, Kiryukhina O, Brunzelle JS, Shuvalova L, Anderson WF. Characterization of the Deoxynucleotide Triphosphate Triphosphohydrolase (dNTPase) Activity of the EF1143 Protein from Enterococcus faecalis and Crystal Structure of the Activator-Substrate Complex. Journal of Biological Chemistry. 2011 Sep;286(38):33158–66. doi: 10.1074/jbc.m111.250456.